Computer Scientist | Bioinformatician | Consultant
I am a researcher with expertise in computer science and bioinformatics, including a PhD from the School of Computing and Information Systems at the University of Melbourne. My work focuses on developing and applying computational and statistical approaches to complex challenges in the life sciences, particularly in medical and biological data analysis. I also have extensive experience in software engineering and high-performance computing, enabling the design of scalable, efficient solutions for scientific applications.
Here is a list of public software projects I have developed or was a major contributor to. A comprehensive list is available in my Github account.
mgikit is a collection of tools used to demultiplex fastq files and generate demultiplexing and quality reports.
View on GitHub →Majority voting method to construct consensus haplotype estimator from multiple phased haplotypes.
View on GitHub →ausarg/pipesnake is a bioinformatics best-practice analysis pipeline for phylogenomic reconstruction starting from short-read 'second-generation' sequencing data.
View on GitHub →Here are some of my recorded talks and presentations available online:
Guest appearance discussing how Australia is building a world-class national bioinformatics infrastructure and supporting Australian Nextflow users.
Access the podcastInteractive prediction and visualisation of protein structure.
Watch on YouTubeABLeS provides computational resources, specialist expertise, and a shared repository of tools and software, tailored to support life science researchers.
Watch on YouTubeIntroducing the Australian Nextflow Seqera Service at the ABACBS National Seminar Series.
Watch on YouTubeI'm always interested in discussing research collaborations, speaking opportunities, or potential industry partnerships. Feel free to reach out if you'd like to connect!